dsmReader
Small program that can extract similarity values from a Domain Similarity Matrix (DSM). DSMs can be obtained from the following Website: https://domainworld.uni-muenster.de/data/dsm/
General options
The general options influence the general behaviour of dsmReader:
- -h, --help
Prints a simple help message with a small description of all the available options.
- -m <FILE>, --matrix <FILE>
The DSM file.
- --d1 <DOMAIN>
The ID of the first domain
- --d2 <DOMAIN>
The ID of the second domain
- -n, --use-negative
Scale values to include negative values.
Simple Usage
$ dsmReader -m pfam-31.dsm --d1 PF00001 --d2 PF00002